Modulation of sensory processing
Neurons in sensory cortex do not respond to the stimulus alone: their activity is also shaped by behavioral context and the internal state of the animal, including attention, arousal, task demands, decision-related feedback, and movement. Disentangling these influences from stimulus-driven activity is difficult, because they overlap in time and are often only indirectly measured. We use statistical models of neural populations, including latent-variable models that infer unobserved shared factors, to separate stimulus-driven responses from state- and behavior-related modulation. We collaborate with the Nienborg lab (NEI) and Huk lab (UCLA) to apply these latent-variable models to recordings in awake primates, asking how much of visual cortical activity is explained by spontaneous movements, attention, eye movements, and top-down feedback, and where in the visual hierarchy these effects arise.
Relevant publications and presentations
- Talluri BC, Kang I, Yates JL, Butts DA, Nienborg H (2025) Pronounced modulation of activity in primate early visual cortex by internal state. Journal of Vision 25 (9): 1966 (VSS 2025). [Abstract]
- Zajkowski W, Quinn K, Seillier L, Butts DA, Nienborg H (2025) Dissociating effects of spatial attention and microsaccades on neural activity in early to mid-level visual areas. Journal of Vision 25 (9): 2849 (VSS 2025). [Abstract]
- Talluri BC, Kang I, Lazere A, Quinn KR, Kaliss N, Yates JL, Butts DA, Nienborg H (2023) Activity in primate visual cortex is minimally driven by spontaneous movements. Nature Neuroscience 26 (11): 1953-9. [Open Access, Twitter summary]
- Quinn KR, Seillier L, Butts DA, Nienborg H (2021) Task-selective feedback in visual cortex lacks spatial selectivity. Nature Communications 12: 4473. [Open access, Data and Code]
- Whiteway MR, Averbeck B, Butts DA (2020) A latent variable approach to decoding neural population activity. bioRxiv: 896423. [Link]
- Whiteway MR, Butts DA (2019) The quest for interpretable models of neural population activity. Current Opinion in Neurobiology 58: 86-93. [PDF]
- Whiteway MR, Socha K, Bonin V, Butts DA (2019) Characterizing the nonlinear structure of shared variability in cortical neuron populations using latent variable models. Neurons, Behavior, Data Analysis, and Theory [Article, PDF]
- Socha K, Whiteway MR, Butts DA, Bonin V (2018) Behavioral response to visual motion impacts population coding in the mouse visual thalamus. bioRxiv. [Preprint]
- Cui Y, Liu L, McFarland JM, Pack CC, Butts DA (in prep) Delta-band oscillations correlate with perceptual decisions and decision-related activity of sensory neurons. [See SFN 2014 poster]
- Whiteway MR, Butts DA (2017) Revealing unobserved factors underlying cortical activity using a rectified latent variable model applied to neural population recordings. Journal of Neurophysiology 117: 919-36. [Journal website]
- Cui Y, Liu L, McFarland JM, Pack CC, Butts DA (2016) Inferring cortical variability from local field potentials. Journal of Neuroscience 36: 4121-4135. [Journal website; also see SFN 2014 poster]